BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C06SP1|AL426979
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1689 0.0
>3x_Contig1264
Length = 6524
Score = 1689 bits (834), Expect = 0.0
Identities = 874/906 (96%)
Strand = Plus / Minus
Query: 1 gatctccattcaaaagtttactatggaatatcatcaaatgtgtattggttcattcgtact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4728 gatctccattcaaaagtttactatggaatatcatcaaatgtgtattggttcattcgtact 4669
Query: 61 ttatgtgttatatattccgggatttcgattggaaagctagccaccacatttctaccaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4668 ttatgtgttatatattccgggatttcgattggaaagctagccaccacatttctaccaatg 4609
Query: 121 atccactgahaacagactagaatgawaattcgtaaagtgtcattgtttgttactggtagt 180
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4608 atccactgaaaacagactagaatgaaaattcgtaaagtgtcattgtttgttactggtagt 4549
Query: 181 ttgtgtttctwttatwtktttwtkataacggtttgaatatgtwatatwatcaaccacaaa 240
|||||||||| |||| | ||| | |||||||||||||||||| |||| ||||||||||||
Sbjct: 4548 ttgtgtttctattatatgtttatgataacggtttgaatatgtaatataatcaaccacaaa 4489
Query: 241 acgatgctttcagaaagttaaawagttattttwtagttwtgtcgtttcattgtagttttt 300
|||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct: 4488 acgatgctttcagaaagttaaaaagttattttatagttatgtcgtttcattgtagtttta 4429
Query: 301 tttttbwytccttgahatttggtaaatttcgtttwttwtctttcaatgacagcatcagtg 360
| ||| ||||||| |||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 4428 tatttgaatccttgaaatttggtaaatttcgtttataatctttcaatgacagcatcagtg 4369
Query: 361 aaagahgatgtggaagcagaaccacccmagtcaccagttctgttcttagcatcagamgca 420
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 4368 aaagaagatgtggaagcagaaccacccaagtcaccagttctgttcttagcatcagaagca 4309
Query: 421 atggtggtcaagacagccttttcmmtcttgtcggcgtgttcagtcaaacccatgtggttc 480
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4308 atggtggtcaagacagccttttcaatcttgtcggcgtgttcagtcaaacccatgtggttc 4249
Query: 481 aacatcatgacagaggatagchacamggcagttgggttagccttgttttgaccagcaata 540
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 4248 aacatcatgacagaggatagcaacaaggcagttgggttagccttgttttgaccagcaata 4189
Query: 541 tctggggcagaaccgtggacagcttcgaagatagamacggtgtgaccaatgttagcggat 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4188 tctggggcagaaccgtggacagcttcgaagatagaaacggtgtgaccaatgttagcggat 4129
Query: 601 ggagtcaaacctagagaaccagcggacaaaccggagttcaaatcggacaagatatcaccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4128 ggagtcaaacctagagaaccagcggacaaaccggagttcaaatcggacaagatatcaccg 4069
Query: 661 tacaagtttggacaaacgacaacgacatcatcgtaggcttctgggtgttggacagtcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4068 tacaagtttggacaaacgacaacgacatcatcgtaggcttctgggtgttggacagtcttc 4009
Query: 721 aagacggtgttatctagcaattcaktttgtwgttcgatgtcagggtattcagaagacaat 780
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 4008 aagacggtgttatctagcaattcagtttgtagttcgatgtcagggtattcagaagacaat 3949
Query: 781 ttcttggcaacgtcaacgaacaaaccatcggccaatctttggatagtggatttgtgaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3948 ttcttggcaacgtcaacgaacaaaccatcggccaatctttggatagtggatttgtgaaca 3889
Query: 841 acaaggacctttgatctatcaacggctctagcgtattcaaaagcgtwtctaatgactctt 900
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3888 acaaggacctttgatctatcaacggctctagcgtattcaaaagcgtatctaatgactctt 3829
Query: 901 tcagaa 906
||||||
Sbjct: 3828 tcagaa 3823
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5168
Number of Sequences: 1807
Number of extensions: 5168
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)